Solution NMR Structure of Protein FeoA from Clostridium thermocellum, Northeast Structural Genomics Consortium Target CmR17
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-13C HSQC | 1.2 mM [U-10% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| 2 | 2D 1H-15N HSQC | 1.1 mM [U-100% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| 3 | 3D HNCO | 1.1 mM [U-100% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| 4 | GFT (4,3)D HCCH COSY | 1.1 mM [U-100% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| 5 | GFT (4,3)D simNOESY | 1.1 mM [U-100% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| 6 | GFT (4,3)D HNCABCA | 1.1 mM [U-100% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| 7 | GFT (4,3)D CABCACONH | 1.1 mM [U-100% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| 8 | GFT (4,3)D HABCABCONHN | 1.1 mM [U-100% 13C; U-100% 15N] protein | 90% H2O/10% D2O | 0.5 | 6.5 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 750 |
| 2 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | CNS | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
| 2 | chemical shift assignment | AutoAssign | Zimmerman, Moseley, Kulikowski and Montelione | |
| 3 | structure solution | AutoStructure | Huang, Tejero, Powers and Montelione | |
| 4 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 5 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 6 | collection | VnmrJ | Varian | |
| 7 | peak picking | XEASY | Bartels et al. | |
| 8 | data analysis | XEASY | Bartels et al. | |
| 9 | refinement | MOLMOL | Koradi, Billeter and Wuthrich | |
| 10 | data analysis | MOLMOL | Koradi, Billeter and Wuthrich | |
| 11 | processing | SPSCAN | Glaser | |
