2K3W | pdb_00002k3w

NMR structure of VPS4A-MIT-CHMP6

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D CBCA(CO)NH	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
2	3D C(CO)NH	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
3	3D HNCA	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
4	3D HNCACB	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
5	3D HBHA(CO)NH	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
6	3D HN(CO)CA	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
7	3D HCCH-COSY	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
8	3D H(CCO)NH	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
9	3D HCCH-TOCSY	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
10	3D 1H-15N NOESY	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
11	3D 1H-13C NOESY	1.4 mM [U-99% 13C; U-99% 15N] protein, 1.8 mM peptide, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
12	3D CBCA(CO)NH	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
13	3D C(CO)NH	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
14	3D HNCA	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
15	3D HNCACB	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
16	3D HBHA(CO)NH	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
17	3D HN(CO)CA	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
18	3D H(CCO)NH	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
19	3D HCCH-TOCSY	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
20	3D HCCH-COSY	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
21	3D 1H-15N NOESY	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298
22	3D 1H-13C NOESY	1.22 mM [U-99% 13C; U-99% 15N] peptide, 1.55 mM protein, 25 mM sodium phosphate, 50 mM sodium chloride, 1 mM EDTA, 10 % D2O	90% H2O/10% D2O	75	5.8	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	600
2	Varian	INOVA	800

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	20
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	X-PLOR NIH	2.19	Schwieters, Kuszewski, Tjandra and Clore
2	refinement	X-PLOR NIH	2.19	Schwieters, Kuszewski, Tjandra and Clore
3	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
4	data analysis	Sparky		Goddard