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Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 0.4 mM [U-13C; U-15N] TAF3_PHD, 150 mM potassium chloride, 20 mM potassium phosphate, 0.01 mM ZnCl2 95% H2O/5% D2O 7 ambient 293 2 3D 1H-13C NOESY 0.4 mM [U-13C; U-15N] TAF3_PHD, 150 mM potassium chloride, 20 mM potassium phosphate, 0.01 mM ZnCl2 95% H2O/5% D2O 7 ambient 293 3 2D 1H-1H NOESY 0.4 mM [U-13C; U-15N] TAF3_PHD, 150 mM potassium chloride, 20 mM potassium phosphate, 0.01 mM ZnCl2 95% H2O/5% D2O 7 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE 750 3 Bruker AVANCE 700 4 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing refinement in explicit solvent using RECOORD protocol CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure solution CYANA Guntert, Mumenthaler and Wuthrich 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 data analysis Sparky Goddard