SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.5 mM [U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| 2 | 3D CBCA(CO)NH | 0.5 mM [U-100% 13C; U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| 3 | 3D HNCACB | 0.5 mM [U-100% 13C; U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| 4 | 3D HCCH-TOCSY | 0.5 mM [U-100% 13C; U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| 5 | 3D H(CCO)NH | 0.5 mM [U-100% 13C; U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| 6 | 3D H(CCO)NH | 0.5 mM [U-100% 13C; U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| 7 | 15N-NOESY HSQC | 0.5 mM [U-100% 13C; U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| 8 | 13C-NOESY HSQC | 0.5 mM [U-100% 13C; U-100% 15N] CrCVNH, 20 mM sodium phosphate, 0.02 % sodium azide | 90% H2O/10% D2O | 6.0 | ambient atm | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| 2 | Bruker | DRX | 700 |
| 3 | Bruker | DRX | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | SA using CNS followed by explicit water refinement implemenetd in ARIA | TopSpin |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 800 |
| Conformers Submitted Total Number | 30 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | TopSpin | Bruker Biospin | |
| 2 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 3 | processing | NMRView | Johnson, One Moon Scientific | |
| 4 | data analysis | NMRView | Johnson, One Moon Scientific | |
| 5 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 6 | structure solution | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
| 7 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
| 8 | structure solution | ARIA | Linge, O'Donoghue and Nilges | |
| 9 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
