2JY0
Solution NMR structure of HCV NS2 protein, membrane segment (1-27)
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 0.9mM NS2(1-27) | trifluoroethanol/water | ambient | 298 | |||
2 | 2D 1H-1H TOCSY | 0.9mM NS2(1-27) | trifluoroethanol/water | ambient | 298 | |||
3 | 2D 1H-13C HSQC | 0.9mM NS2(1-27) | trifluoroethanol/water | ambient | 298 | |||
4 | 2D 1H-1H NOESY | 0.9mM NS2(1-27) | trifluoroethanol/water | ambient | 308 | |||
5 | 2D 1H-1H TOCSY | 0.9mM NS2(1-27) | trifluoroethanol/water | ambient | 308 | |||
6 | 2D 1H-13C HSQC | 0.9mM NS2(1-27) | trifluoroethanol/water | ambient | 308 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DGSA-distance geometry simulated annealing | VNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 40 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | Varian | |
2 | processing | VNMR | Varian | |
3 | chemical shift assignment | Sparky | Goddard | |
4 | peak picking | Sparky | Goddard | |
5 | data analysis | Sparky | Goddard | |
6 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
7 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |