2JX1 | pdb_00002jx1

Structure of the fifth zinc finger of Myelin Transcription Factor 1 in complex with RARE DNA

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D NOESY	2.5mM MES, 10mM sodium chloride, 1mM DTT	100% H2O	10	6.5	1 atm	278
2	2D TOCSY	2.5mM MES, 10mM sodium chloride, 1mM DTT	100% H2O	10	6.5	1 atm	278
3	3D 15N-separated NOESY	2.5mM MES, 10mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
4	3D HNHA	2.5mM MES, 10mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
5	2D HSQC	10mM phosphate, 50mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
6	3D HNCA	10mM phosphate, 50mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
7	3D HNCACB	10mM phosphate, 50mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
8	3D CBCA(CO)NH	10mM phosphate, 50mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
9	3D HNCO	10mM phosphate, 50mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
10	3D HCCH-TOCSY	10mM phosphate, 50mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298
11	2D single & double half filtered NOESYs	10mM phosphate, 50mM sodium chloride, 1mM DTT	100% H2O	50	7.4	1 atm	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	600
2	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
HADDOCK docking, simulated annealing	simulated annealing, water refinement	CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	10
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.