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Solution structure of the THAP-zinc finger of THAP1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 1 mM THAP domain 90% H2O/10% D2O 10 6.8 ambient 296 2 2D 1H-1H TOCSY 1 mM THAP domain 90% H2O/10% D2O 10 6.8 ambient 296 3 2D 1H-1H COSY 1 mM THAP domain 90% H2O/10% D2O 10 6.8 ambient 296 4 2D 1H-15N HSQC 1 mM [U-15N] THAP domain 90% H2O/10% D2O 10 6.8 ambient 296 5 3D 1H-15N NOESY 1 mM [U-15N] THAP domain 90% H2O/10% D2O 10 6.8 ambient 296 6 3D 1H-15N TOCSY 1 mM [U-15N] THAP domain 90% H2O/10% D2O 10 6.8 ambient 296
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 700 3 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing XEASY
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis XEASY Bartels et al. 2 data analysis NMRView Johnson, One Moon Scientific 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 refinement CNS BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN