2JR2 | pdb_00002jr2

Solution NMR structure of homodimer CPS_2611 from Colwellia psychrerythraea. Northeast Structural Genomics Consortium target CsR4.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
22D 1H-13C HSQC1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
33D 1H-15N NOESY1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
43D 1H-13C NOESY aliph1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
53D HNCACB1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
62D 1H-13C HSQC1.1 mM [U-5% 13C; U-100% 15N] protein, 100 mM sodium chloride, 5 mM calcium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide95% H2O/5% D2O0.15.5ambient293
74D 1H-13C NOESY1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 5 mM calcium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide100% D2O0.15.5ambient293
83D HBHA(CO)NH1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
93D HNHA1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
103D CBCA(CO)NH1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
113D HNCA1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
123D HN(CO)CA1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
133D HNCO1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
143D C(CO)NH1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
153D HCCH-COSY1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
163D HCCH-TOCSY1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
172D 1H-13C HSQC1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 5 mM calcium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide100% D2O0.15.5ambient293
182D 1H-15N HSQC1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 5 mM calcium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide100% D2O0.15.5ambient293
193D edited filtered 1H-13C NOESY0.5 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 5 mM calcium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 0.5 mM protein100% D2O0.15.5ambient293
203D 1H-13C NOESY arom1 mM [U-13C; U-15N] protein, 100 mM sodium chloride, 20 mM ammonium acetate, 5 mM DTT, 0.02 % sodium azide, 5 mM calcium chloride95% H2O/5% D2O0.15.5ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing, CNS water refinementXplor-NIH, CNS 1.1NMRPipe
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipelinux9Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2collectionVNMR6.1CVarian
3data analysisAutoStructure2.1.1Huang, Tejero, Powers and Montelione
4structure solutionX-PLOR NIH2.15.0Schwieters, Kuszewski, Tjandra and Clore
5refinementCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
6data analysisSparky3.1Goddard
7structure validationPSVS1.3Bhattacharya and Montelione
8chemical shift assignmentAutoAssignZimmerman, Moseley, Kulikowski and Montelione