2JQR | pdb_00002jqr

Solution model of crosslinked complex of cytochrome c and adrenodoxin

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.4 mM [U-98% 15N] CcV28C, 0.2-0.6 mM AdxL80C, 20 mM potassium phosphate	95% H2O/5% D2O		7.4	ambient	285
2	2D 1H-15N HSQC	0.4 mM [U-98% 15N] AdxL80C, 0.2-0.6 mM CcV28C, 20 mM potassium phosphate	95% H2O/5% D2O		7.4	ambient	285
3	2D 1H-15N HSQC	1.0 mM [U-98% 15N] CcV28C, 5 mM DTT, 20 mM potassium phosphate	95% H2O/5% D2O		7.4	ambient	285
4	2D 1H-15N HSQC	0.6 mM [U-98% 15N] AdxL80C, 5 mM DTT, 20 mM potassium phosphate	95% H2O/5% D2O		7.4	ambient	285
5	3D 1H-15N NOESY	0.4 mM [U-98% 15N] CcV28C, 0.2-0.6 mM AdxL80C, 20 mM potassium phosphate	95% H2O/5% D2O	0.4	7.4	ambient	301
6	3D 1H-15N NOESY	0.4 mM [U-98% 15N] AdxL80C, 0.2-0.6 mM CcV28C, 20 mM potassium phosphate	95% H2O/5% D2O	0.4	7.4	ambient	301
7	3D 1H-15N NOESY	0.6 mM [U-98% 15N] AdxL80C, 5 mM DTT, 20 mM potassium phosphate	95% H2O/5% D2O	0.4	7.4	ambient	301
8	3D 1H-15N TOCSY	0.6 mM [U-98% 15N] AdxL80C, 5 mM DTT, 20 mM potassium phosphate	95% H2O/5% D2O	0.4	7.4	ambient	301

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DMX	600

NMR Refinement
Method	Details	Software
molecular dynamics	All structure models are from rigid body modeling. The coordinate of Cytochrome C (Chain A) is from PDB entry 1YCC. All complex structure models are superimposed with Chain A.	Azara

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	10
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	Azara		Boucher
2	data analysis	ANSIG		Kraulis
3	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore