SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
22D 1H-13C HSQC1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
33D HNCACB1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
43D CBCA(CO)NH1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
53D HBHA(CO)NH1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
63D HNHA1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
73D C(CO)NH1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
83D H(CCO)NH1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
93D HCCH-COSY1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
103D HCCH-TOCSY1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
113D 1H-13C NOESY1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
123D 1H-15N NOESY1.8 mM [U-100% 13C; U-100% 15N] VPS4B MIT90% H2O/10% D2O505.65ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingRefinement using anneal.inp and using summed NOE constraints with max T of 3000 K for simulated annealing.Felix
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsHalf-filtered NOESYs provided the intermolecular NOEs
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix2004Accelrys Software Inc.
2chemical shift assignmentSparky3.112Goddard
3peak pickingSparky3.112Goddard
4data analysisSparky3.112Goddard
5structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
6refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read