2JPL
Lactococcin G-a in TFE
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-15N] lcnG a TFE, 90 % [U-2H] TFE, 0.1 % TFA, 0.2 mM DSS | 90% TFE/10% H2O | 2.8 | ambient | 298 | ||
2 | 2D 1H-1H TOCSY | 1 mM [U-15N] lcnG a TFE, 90 % [U-2H] TFE, 0.1 % TFA, 0.2 mM DSS | 90% TFE/10% H2O | 2.8 | ambient | 298 | ||
3 | 2D 1H-1H NOESY | 1 mM [U-15N] lcnG a TFE, 90 % [U-2H] TFE, 0.1 % TFA, 0.2 mM DSS | 90% TFE/10% H2O | 2.8 | ambient | 298 | ||
4 | 3D 1H-15N TOCSY | 1 mM [U-15N] lcnG a TFE, 90 % [U-2H] TFE, 0.1 % TFA, 0.2 mM DSS | 90% TFE/10% H2O | 2.8 | ambient | 298 | ||
5 | 3D 1H-15N NOESY | 1 mM [U-15N] lcnG a TFE, 90 % [U-2H] TFE, 0.1 % TFA, 0.2 mM DSS | 90% TFE/10% H2O | 2.8 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 102 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 1.3 | Bruker Biospin |
2 | processing | TopSpin | 1.3 | Bruker Biospin |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | chemical shift assignment | CARA | 1.4.1 | Keller and Wuthrich |
5 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
6 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
7 | visualization | MOLMOL | 2k.2 | Koradi, Billeter and Wuthrich |
8 | rmsd value calculation | MOLMOL | 2k.2 | Koradi, Billeter and Wuthrich |
9 | refinement | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |