2JO7

Solution structure of the adhesion protein Bd37 from Babesia divergens

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.8 mM [U-99% 15N] delta-Bd37, 95% H2O/5% D2	95% H2O/5% D2O	50	6.8	ambient	310
2	3D 1H-15N NOESY	0.8 mM [U-99% 15N] delta-Bd37, 95% H2O/5% D2	95% H2O/5% D2O	50	6.8	ambient	310
3	3D 1H-13C NOESY	0.8 mM [U-99% 13C; U-99% 15N] delta-Bd37	95% H2O/5% D2O	50	6.8	ambient	310
4	3D 1H-15N NOESY	0.8 mM [U-99% 15N] delta-Bd37, 95% H2O/5% D2	95% H2O/5% D2O	50	6.8	ambient	310
5	(in-phase/antiphase) [15N-1H] HSQC	0.8 mM [U-99% 15N] delta-Bd37, 95% H2O/5% D2	95% H2O/5% D2O	50	6.8	ambient	310

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
molecular dynamics	Use of 1DNH residual dipolar couplings values in order to improve local geometry	PREDITOR

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	geometry optimization	PREDITOR	1	Berjanskii
2	data analysis	CINDY		PADILLA
3	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
4	refinement	Amber	8	Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Koll
5	processing	Gifa	4	Delsuc
6	geometry optimization	TALOS		Cornilescu, Delaglio and Bax