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The solution structure of the monomeric species of the C terminal domain of the CA protein of HIV-1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1 mM [U-15N] protein, 100 mM potassium phosphate, 0.00001 mM TSP 90% H2O/10% D2O 0.1 7 ambient 293 2 2D TOCSY 1 mM [U-15N] protein, 100 mM potassium phosphate, 0.00001 mM TSP 90% H2O/10% D2O 0.1 7 ambient 293 3 2D 1H-15N HSQC 1 mM [U-15N] protein, 100 mM potassium phosphate, 0.00001 mM TSP 90% H2O/10% D2O 0.1 7 ambient 293 4 3D 1H-15N NOESY 1 mM [U-15N] protein, 100 mM potassium phosphate, 0.00001 mM TSP 90% H2O/10% D2O 0.1 7 ambient 293 5 3D 1H-15N TOCSY 1 mM [U-15N] protein, 100 mM potassium phosphate, 0.00001 mM TSP 90% H2O/10% D2O 0.1 7 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500
NMR Refinement Method Details Software molecular dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 30 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA 2.1 P Guntert, C Mumenthaler and K Wuthrich 2 chemical shift assignment Sparky 3.0 T Goddard 3 peak picking Sparky 3.0 T Goddard 4 refinement Amber 8 DA Case, TA Darden, TE Cheatham, III, CL Simmerling, J Wang, RE Duke, 5 collection XwinNMR Bruker Biospin