2JNK

Solution structure of a dockerin-containing modular pair from a family 84 glycoside hydrolase


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
23D CBCA(CO)NH1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
33D HNCO1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
43D HNCACB1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
53D H(CCO)NH1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
63D HCCH-TOCSY1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
73D HNHA1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
83D 1H-13C NOESY1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
93D 1H-15N NOESY1mM protein, 25 mM HEPES, 50 mM sodium chloride, 5 mM Calclium chloride, 0.5 mM DSS90% H2O/10% D2O6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing1000 molecular dynamic stepsNMRView
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisNMRView5.2.2Johnson, One Moon Scientific
2peak pickingNMRView5.2.2Johnson, One Moon Scientific
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4structure solutionCNSBrunger, Adams, Clore, Gros, Nilges and Read
5refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read