Solution structure of chicken villin headpiece subdomain containing a fluorinated side chain in the core
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 4 mM F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 2 | 2D 1H-13C HSQC | 4 mM F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 3 | 2D COSY | 4 mM F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 4 | 2D TOCSY | 4 mM F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 5 | 2D NOESY | 4 mM F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 6 | 2D 1H-15N HSQC | 2 mM selectively 15N-[Ala, Phe, Leu] F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 7 | 2D HNCO | 2 mM selectively 15N-[Ala, Phe, Leu] F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 8 | 2D HNCACB | 2 mM selectively 15N-[Ala, Phe, Leu] F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 9 | 2D HNHA | 2 mM selectively 15N-[Ala, Phe, Leu] F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 10 | 2D HNHB | 2 mM selectively 15N-[Ala, Phe, Leu] F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| 11 | 19F-HOESY | 4 mM F5-Phe-cVHP | 93% H2O/7% D2O | 10 | 5.0 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 500 |
| 2 | Bruker | AVANCE | 600 |
| 3 | Bruker | AVANCE | 750 |
| 4 | Varian | INOVA | 600 |
| 5 | Varian | INOVA | 800 |
| 6 | Varian | INOVA | 900 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics, molecular dynamics | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | Delaglio, F. et al. | |
| 2 | data analysis | PIPP | Garrett, D. | |
| 3 | data analysis | Sparky | Goddard, T. | |
| 4 | structure solution | CYANA | Guntert, P., Mumenthaler, C. and Wuthrich, K. | |
| 5 | structure solution | X-PLOR NIH | Schwieters, C.D. et al. | |
| 6 | refinement | X-PLOR NIH | Schwieters, C.D. et al. | |














