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Human Thrombin Hirugen Inhibitor complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.8 PH 6.80
Crystal Properties Matthews coefficient Solvent content 2.47 49.81
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.135 α = 90 b = 71.683 β = 100.22 c = 71.648 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU CCD MIRRORS 2002-05-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 19.98 100 0.55 3.5 16566
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.26 98 0.33
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.21 19.98 16566 882 100 0.165 0.163 0.1633 0.196 0.1951 RANDOM 34.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.19 -0.68 -0.4 0.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.769 r_dihedral_angle_4_deg 11.942 r_dihedral_angle_3_deg 10.678 r_scangle_it 4.663 r_dihedral_angle_1_deg 4.297 r_scbond_it 3.167 r_mcangle_it 2.474 r_angle_refined_deg 1.538 r_mcbond_it 1.253 r_nbtor_refined 0.313
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.769 r_dihedral_angle_4_deg 11.942 r_dihedral_angle_3_deg 10.678 r_scangle_it 4.663 r_dihedral_angle_1_deg 4.297 r_scbond_it 3.167 r_mcangle_it 2.474 r_angle_refined_deg 1.538 r_mcbond_it 1.253 r_nbtor_refined 0.313 r_symmetry_hbond_refined 0.23 r_nbd_refined 0.204 r_symmetry_vdw_refined 0.202 r_xyhbond_nbd_refined 0.146 r_chiral_restr 0.105 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2351 Nucleic Acid Atoms Solvent Atoms 182 Heterogen Atoms 30
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling