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Crystal structure of the conserved hypothetical protein Rv1873 from Mycobacterium tuberculosis at 1.38 A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 AMMONIUM SULPHATE, MES BUFFER, GLYCEROL, ETHYLEN GLYCOL, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
Crystal Properties Matthews coefficient Solvent content 1.77 30.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 33.44 α = 90 b = 31.627 β = 90.8 c = 53.187 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2005-10-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.38 50 94.2 0.03 15.5 1.9 21820
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.38 1.43 85.8 0.4 2 1.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1.38 35 20717 1091 94.3 0.169 0.167 0.1678 0.2 0.1698 RANDOM 15.21
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.45 0.29 -0.29 0.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.473 r_dihedral_angle_4_deg 25.543 r_dihedral_angle_3_deg 11.361 r_dihedral_angle_1_deg 4.979 r_scangle_it 4.312 r_scbond_it 2.665 r_mcangle_it 1.574 r_angle_refined_deg 1.166 r_mcbond_it 0.934 r_nbtor_refined 0.311
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.473 r_dihedral_angle_4_deg 25.543 r_dihedral_angle_3_deg 11.361 r_dihedral_angle_1_deg 4.979 r_scangle_it 4.312 r_scbond_it 2.665 r_mcangle_it 1.574 r_angle_refined_deg 1.166 r_mcbond_it 0.934 r_nbtor_refined 0.311 r_symmetry_vdw_refined 0.191 r_nbd_refined 0.19 r_symmetry_hbond_refined 0.162 r_xyhbond_nbd_refined 0.111 r_chiral_restr 0.077 r_bond_refined_d 0.008 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1109 Nucleic Acid Atoms Solvent Atoms 161 Heterogen Atoms 17
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling