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Solution structure of a linear analog of the cyclic squash trypsin inhibitor MCoTI-II
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1.2 mM peptide, 90% H2O, 10% D2O 90% H2O/10% D2O 3.0 1 atm 285 2 2D TOCSY 1.2 mM peptide, 90% H2O, 10% D2O 90% H2O/10% D2O 3.0 1 atm 285 3 2D NOESY 1.2 mM peptide, 90% H2O, 10% D2O 90% H2O/10% D2O 3.0 1 atm 300 4 2D TOCSY 1.2 mM peptide, 90% H2O, 10% D2O 90% H2O/10% D2O 3.0 1 atm 300 5 2D 1H-13C HSQC 1.2 mM peptide D2O 3.0 1 atm 300 6 2D NOESY 1.2 mM peptide D2O 3.0 1 atm 300 7 2D TOCSY 1.2 mM peptide D2O 3.0 1 atm 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics,
simulated annealing,
restrained molecular dynamics XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 30 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 3.1 bruker 2 processing XwinNMR 3.1 bruker 3 structure solution CYANA 2.1 Guntert, P. et al. 4 refinement Amber 8 Case, D.A. et al.