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2-Hydroxychromene-2-carboxylate Isomerase: a Kappa Class Glutathione-S-Transferase from Pseudomonas putida
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 microbatch under oil 6.1 294 crystallization solution: 1.2M sodium dihydrogen phosphate, 0.8M potassium hydrogen phosphate,0.2M lithium sulfate, 0.1M CAPS pH 6.1.
Protein and crystallization solutions were mixed 1:1., microbatch under oil, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.26 45.51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.533 α = 90 b = 75.818 β = 90 c = 38.444 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 2006-06-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.0 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.3 24.75 87.4 0.054 12.6 43839
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.3 1.35 52.4 0.334 2 2694
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.3 24.75 41533 2282 83.87 0.18158 0.1801 0.181 0.20802 0.2095 RANDOM 20.974
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.31 -0.28 1.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.871 r_dihedral_angle_4_deg 21.988 r_dihedral_angle_3_deg 15.368 r_dihedral_angle_1_deg 5.11 r_scangle_it 4.304 r_scbond_it 2.911 r_angle_refined_deg 2.105 r_mcangle_it 1.977 r_mcbond_it 1.325 r_chiral_restr 0.336
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.871 r_dihedral_angle_4_deg 21.988 r_dihedral_angle_3_deg 15.368 r_dihedral_angle_1_deg 5.11 r_scangle_it 4.304 r_scbond_it 2.911 r_angle_refined_deg 2.105 r_mcangle_it 1.977 r_mcbond_it 1.325 r_chiral_restr 0.336 r_nbtor_refined 0.325 r_nbd_refined 0.236 r_symmetry_vdw_refined 0.201 r_xyhbond_nbd_refined 0.187 r_symmetry_hbond_refined 0.154 r_bond_refined_d 0.02 r_gen_planes_refined 0.012 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1630 Nucleic Acid Atoms Solvent Atoms 249 Heterogen Atoms 64
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling