2IK8

Crystal structure of the heterodimeric complex of human RGS16 and activated Gi alpha 1


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.52930.2M (NH4)2SO4, 0.1M Bis-Tris, pH 5.5, 25% PEG3350 , VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.5251.21

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 82.656α = 90
b = 104.312β = 90
c = 124.048γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 225 mm CCD2006-03-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SA0.9198SLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.75099.32943827900
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.72.899.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ID = 2GTP2.7149.62790027900149198.730.235440.235440.23250.29106RANDOM52.189
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
5.15-4.39-0.76
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.138
r_dihedral_angle_4_deg15.315
r_dihedral_angle_3_deg14.991
r_dihedral_angle_1_deg5.529
r_scangle_it1.21
r_angle_refined_deg1.06
r_angle_other_deg0.82
r_scbond_it0.768
r_mcangle_it0.485
r_mcbond_it0.279
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.138
r_dihedral_angle_4_deg15.315
r_dihedral_angle_3_deg14.991
r_dihedral_angle_1_deg5.529
r_scangle_it1.21
r_angle_refined_deg1.06
r_angle_other_deg0.82
r_scbond_it0.768
r_mcangle_it0.485
r_mcbond_it0.279
r_symmetry_hbond_refined0.216
r_nbd_refined0.214
r_symmetry_vdw_other0.208
r_metal_ion_refined0.184
r_nbtor_refined0.183
r_nbd_other0.174
r_xyhbond_nbd_refined0.144
r_nbtor_other0.085
r_symmetry_vdw_refined0.074
r_mcbond_other0.056
r_chiral_restr0.054
r_bond_refined_d0.008
r_gen_planes_refined0.003
r_bond_other_d0.001
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6670
Nucleic Acid Atoms
Solvent Atoms36
Heterogen Atoms108

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing