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Crystal structure of Human Regulator of G-protein signaling 8, RGS8
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2BT2 Swissmodel based on pdb entry 2BT2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.20M NaI; 20.0% PEG 3350; 10.0% Ethylene Glycol, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.28 46.01
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.967 α = 90 b = 65.967 β = 90 c = 76.377 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2006-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.978 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 50 95.7 17206 17199
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.76 99.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT Swissmodel based on pdb entry 2BT2 1.7 27.5 16320 16320 878 95.71 0.17707 0.17707 0.17524 0.1815 0.21119 0.2169 RANDOM 12.144
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.2 0.2 -0.41
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.115 r_dihedral_angle_4_deg 21.025 r_dihedral_angle_3_deg 11.283 r_scangle_it 8.632 r_scbond_it 6.384 r_dihedral_angle_1_deg 4.739 r_mcangle_it 4.135 r_mcbond_it 3.024 r_mcbond_other 1.192 r_angle_refined_deg 1.141
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.115 r_dihedral_angle_4_deg 21.025 r_dihedral_angle_3_deg 11.283 r_scangle_it 8.632 r_scbond_it 6.384 r_dihedral_angle_1_deg 4.739 r_mcangle_it 4.135 r_mcbond_it 3.024 r_mcbond_other 1.192 r_angle_refined_deg 1.141 r_angle_other_deg 0.901 r_symmetry_vdw_other 0.294 r_nbd_refined 0.213 r_symmetry_hbond_refined 0.192 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.181 r_nbd_other 0.175 r_symmetry_vdw_refined 0.135 r_nbtor_other 0.082 r_chiral_restr 0.067 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1043 Nucleic Acid Atoms Solvent Atoms 170 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing