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NMR solution structure of Human ephrinB2 ectodomain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 15N-edited HSQC-tocsy 0.5mM ephrinB2 ectodomain U-15N,13C; 20mM phosphate buffer(pH 6.8); 90% H2O, 10% D2O 90% H2O/10% D2O 6.8 1 atm 293 2 15N-edited HSQC-noesy 0.5mM ephrinB2 ectodomain U-15N,13C; 20mM phosphate buffer(pH 6.8); 90% H2O, 10% D2O 90% H2O/10% D2O 6.8 1 atm 293 3 HNCACB 0.5mM ephrinB2 ectodomain U-15N,13C; 20mM phosphate buffer(pH 6.8); 90% H2O, 10% D2O 90% H2O/10% D2O 6.8 1 atm 293 4 CBCA(CO)NH 0.5mM ephrinB2 ectodomain U-15N,13C; 20mM phosphate buffer(pH 6.8); 90% H2O, 10% D2O 90% H2O/10% D2O 6.8 1 atm 293 5 HNCO 0.5mM ephrinB2 ectodomain U-15N,13C; 20mM phosphate buffer(pH 6.8); 90% H2O, 10% D2O 90% H2O/10% D2O 6.8 1 atm 293 6 13C-NOESY 0.5mM ephrinB2 ectodomain U-15N,13C; 20mM phosphate buffer(pH 6.8); 90% H2O, 10% D2O 90% H2O/10% D2O 6.8 1 atm 293 7 HCCH-tocsy 0.5mM ephrinB2 ectodomain U-15N,13C; 20mM phosphate buffer(pH 6.8); 100% D2O 100% D2O 6.8 1 atm 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software distance geometry CYANA
NMR Ensemble Information Conformer Selection Criteria target funtion less than 2 Conformers Calculated Total Number 200 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert, P. 2 processing NMRPipe Delaglio, F. 3 refinement Amber Case DA et al. 4 data analysis NMRView Johnson, B.A.