2HI6 | pdb_00002hi6

Solution NMR structure of UPF0107 protein AF_0055, Northeast Structural Genomics Consortium Target GR101

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESY	5-5.5mM CaCl2, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02% NaN3, pH 5.5, 5% D2O, 95% H2O U-15N,13C	95% H2O/5% D2O		5.5	ambient	298
2	GFT (4,3)D HNNCABCA	5-5.5mM CaCl2, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02% NaN3, pH 5.5, 5% D2O, 95% H2O U-15N,13C	95% H2O/5% D2O		5.5	ambient	298
3	GFT (4,3)D CABCA(CO)NHN	5-5.5mM CaCl2, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02% NaN3, pH 5.5, 5% D2O, 95% H2O U-15N,13C	95% H2O/5% D2O		5.5	ambient	298
4	GFT (4,3)D HABCAB(CO)NHN	5-5.5mM CaCl2, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02% NaN3, pH 5.5, 5% D2O, 95% H2O U-15N,13C	95% H2O/5% D2O		5.5	ambient	298
5	GFT (4,3)D HCCH	5-5.5mM CaCl2, 100mM NaCl, 20mM NH4OAc, 10mM DTT, 0.02% NaN3, pH 5.5, 5% D2O, 95% H2O U-15N,13C	95% H2O/5% D2O		5.5	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	750
2	Varian	INOVA	600

NMR Refinement
Method	Details	Software
simulated annealing molecular dynamics torsion angle dynamics		VNMR

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (fewest violations)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VNMR	6.1c
2	processing	NMRPipe	2.3	Delaglio, F
3	data analysis	AutoAssign	1.15.1	Moseley, H.
4	data analysis	AutoStructure	2.0	HUANG, Y.J.
5	structure solution	CYANA	2.1	GUNTERT, P.
6	refinement	CNS	1.1	Brunger, A.T.