2H80

NMR structures of SAM domain of Deleted in Liver Cancer 2 (DLC2)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY1mM 15N, 13C labelled, 20mM phosphate buffer, pH 7.1, 0.05% NaN3, 4mM DTT; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate7.1ambient293
23D_15N-separated_NOESY1mM 15N, 13C labelled, 20mM phosphate buffer, pH 7.1, 0.05% NaN3, 4mM DTT; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate7.1ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealing, molecular dynamics, torsion angle dynamicsThe structure was based on 1098 NOE-derived distance constraints and 104 angel constraints from TalosNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe1Frank Delaglio
2data analysisSparky3.110Goddard, T.D., Kneller,D.G.
3structure solutionCYANA2.1Gntert, P.
4refinementAmber7Case, D.A.