Solution NMR Structure of Protein PA4359 from Pseudomonas aeruginosa: Northeast Structural Genomics Consortium Target PaT89
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | GFT (4,3)D HNNCABCA | 10 mM tris 300 mM NaCl 5% glycerol 0.01% NaN3 1 mM benzamidiine | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
| 2 | GFT (4,3)D CABCA(CO)NHN | 10 mM tris 300 mM NaCl 5% glycerol 0.01% NaN3 1 mM benzamidiine | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
| 3 | GFT (4,3)D HABCAB(CO)NHN | 10 mM tris 300 mM NaCl 5% glycerol 0.01% NaN3 1 mM benzamidiine | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
| 4 | GFT (4,3)D HCCH | 10 mM tris 300 mM NaCl 5% glycerol 0.01% NaN3 1 mM benzamidiine | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
| 5 | SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESY | 10 mM tris 300 mM NaCl 5% glycerol 0.01% NaN3 1 mM benzamidiine | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| distance geometry, simulated annealing, molecular dynamics, torsion angle dynamics | DYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | This structure was determined using GFT techniques. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | DYANA | 1.5 | Peter Gntert |
| 2 | processing | NMRPipe | 2.3 | F. Delaglio |
| 3 | structure solution | CYANA | 2.1 | Peter Gntert |
| 4 | refinement | CNS | 1.1 | A.T.Brunger |
| 5 | data analysis | XEASY | 1.3 | Christian Bartels and Tai-he Xia |
| 6 | data analysis | AutoStructure | 2.0.0 | Huang, Y. J. |
| 7 | data analysis | UBNMR | 1.0 | Yang Shen |














