2H2P

Crystal structure of CLC-ec1 in complex with Fab fragment in SeCN-


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.5295100 mM KSCN, PEG 300 38%, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
4.1370.19

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 220.581α = 90
b = 121.578β = 128.25
c = 151.24γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.10.98ALS8.2.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
135098.90.08712.53.761583
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
33.1193.80.6523.25821

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT3.1505653056530283499.060.27810.27810.2780.28RANDOM76.512
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-5.65-6.997.97-10.97
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.232
r_dihedral_angle_4_deg21.085
r_dihedral_angle_3_deg15.87
r_angle_refined_deg1.494
r_dihedral_angle_1_deg1.414
r_nbtor_refined0.342
r_nbd_refined0.332
r_symmetry_vdw_refined0.293
r_symmetry_hbond_refined0.258
r_xyhbond_nbd_refined0.219
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.232
r_dihedral_angle_4_deg21.085
r_dihedral_angle_3_deg15.87
r_angle_refined_deg1.494
r_dihedral_angle_1_deg1.414
r_nbtor_refined0.342
r_nbd_refined0.332
r_symmetry_vdw_refined0.293
r_symmetry_hbond_refined0.258
r_xyhbond_nbd_refined0.219
r_chiral_restr0.094
r_bond_refined_d0.01
r_gen_planes_refined0.01
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms13223
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms8

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
ADSCdata collection