2H1Z
Structure of a dual-target spider toxin
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1 mM U-15N,13C hybrid atracotoxin; 50 mM NaCl; 20 mM sodium phosphate, 90% H2O,10% D2O | 90% H2O/10% D2O | 50 mM NaCl, 20 mM NaPi | 6.0 | 1 atm | 298 | |
2 | HNHA | 1 mM U-15N,13C hybrid atracotoxin; 50 mM NaCl; 20 mM sodium phosphate, 90% H2O,10% D2O | 90% H2O/10% D2O | 50 mM NaCl, 20 mM NaPi | 6.0 | 1 atm | 298 | |
3 | HNHB | 1 mM U-15N,13C hybrid atracotoxin; 50 mM NaCl; 20 mM sodium phosphate, 90% H2O,10% D2O | 90% H2O/10% D2O | 50 mM NaCl, 20 mM NaPi | 6.0 | 1 atm | 298 | |
4 | 3D_13C-separated_NOESY | 1 mM U-15N,13C hybrid atracotoxin; 50 mM NaCl; 20 mM sodium phosphate | 100% D2O | 50 mM NaCl, 20 mM NaPi | 6.0 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 500 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics (CYANA) followed by simulated annealing (X-PLOR) | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | Dihedral-angle restraints were generated from TALOS analysis of chemical shift data. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J., and Bax, A. | |
2 | data analysis | XEASY | Xia, T.-H. and Bartels, C. | |
3 | structure solution | CYANA | 1.1 | Guntert, P. and Herrman, T. |
4 | refinement | X-PLOR | 3.851 | Brunger, A. |