Solution structure of the SAM (sterile alpha motif) domain of DLC1 (deleted in liver cancer 1)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_13C-separated_NOESY | 1mM DLC1-SAM 15N, 13C-labaled; 50mM sodium phosphate buffer(pH 7.0); 3mM DTT; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM sodium phosphate | 7.0 | 1 atm | 298 | |
| 2 | 3D_15N-separated_NOESY | 1mM DLC1-SAM 15N-labaled; 50mM sodium phosphate buffer(pH 7.0); 3mM DTT; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM sodium phosphate | 7.0 | 1 atm | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | XwinNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | The structure was determined using triple-resonance NMR spectroscopy. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | XwinNMR | 3.5 | BRUKER |
| 2 | data analysis | NMRView | 5.2.2_01 | Johnson, B.A. |
| 3 | processing | NMRPipe | 2004.126.16.02 | Delaglio, F. et al |
| 4 | refinement | Amber | 7 | Case, D.A. et al |
| 5 | refinement | TALOS | 2003.027.13.05 | Cornilescu,G. et al |
| 6 | structure solution | CYANA | 1.0.5 | Guntert, P. et al |
