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Solution structure of the SH3 domain of human Ras GTPase-activating protein 1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 1.17mM 13C, 15N-labeled protein; 20mM d-Tris-HCl (pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3 10% D2O; 90% H2O 120mM 7.0 ambient 298 2 3D_15N-separated_NOESY 1.17mM 13C, 15N-labeled protein; 20mM d-Tris-HCl (pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3 10% D2O; 90% H2O 120mM 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 JEOL ECA 800 2 JEOL ECA 700
NMR Refinement Method Details Software torsion angle dynamics Delta NMR
NMR Ensemble Information Conformer Selection Criteria target function, structures with the lowest energy, structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details spectrometer_id 1 for 3D_15N-separated_NOESY; spectrometer_id 2 for 3D_13C-separated_NOESY
Computation: NMR Software # Classification Version Software Name Author 1 collection Delta NMR 4.3.2 JEOL 2 processing NMRPipe 20031121 Delaglio, F. 3 data analysis NMRView 5.0.4 Johnson, B. A. 4 data analysis KUJIRA 0.934 KOBAYASHI, N. 5 structure solution CYANA 2.0.17 Guntert, P. 6 refinement CYANA 2.0.17 Guntert, P.