Monomeric human telomere DNA tetraplex with 3+1 strand fold topology, two edgewise loops and double-chain reversal loop, NMR, 12 structures
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 1H-1H NOESY | 70 MM KCL 20 MM POTASSIUM PHOSPHATE 90% H2O 10% D2O | 90% H2O/10% D2O | 70 mM | 7.0 | 1 atm | 298 | |
| 2 | 1H-1H TOCSY | 70 MM KCL 20 MM POTASSIUM PHOSPHATE 100% D2O | 100% D2O | 70 mM | 7.0 | 1 atm | 298 | |
| 3 | 1H-31P COSY | 70 MM KCL 20 MM POTASSIUM PHOSPHATE 100% D2O | 100% D2O | 70 mM | 7.0 | 1 atm | 298 | |
| 4 | 1H-1H COSY | 70 MM KCL 20 MM POTASSIUM PHOSPHATE 100% D2O | 100% D2O | 70 mM | 7.0 | 1 atm | 298 | |
| 5 | 1H-15N JRHMQC | 70 MM KCL 20 MM POTASSIUM PHOSPHATE 90% H2O 10% D2O | 90% H2O/10% D2O | 70 mM | 7.0 | 1 atm | 298 | |
| 6 | 1H-15N HMBC | 70 MM KCL 20 MM POTASSIUM PHOSPHATE 100% D2O | 100% D2O | 70 mM | 7.0 | 1 atm | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| 2 | Bruker | AVANCE | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| TORSION ANGLE DYNAMICS CARTESIAN DYNAMICS MATRIX RELAXATION | VNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | back calculated data agree with experimental NOESY spectrum |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 12 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | VNMR | 6.0 | VARIAN |
| 2 | data analysis | Felix | 2000 | ACCELRYS |
| 3 | structure solution | X-PLOR | 3.851 | AT BRUNGER |
| 4 | refinement | X-PLOR | 3.851 | AT BRUNGER |














