2GJI

NMR solution structure of VP9 from White Spot Syndrome Virus


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY20mM phosphate buffer, 3mM VP9; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate buffer6.72ambient298
23D_15N-separated_NOESY20mM phosphate buffer, 3mM VP9; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate buffer6.72ambient298
3HCCH-TOCSY20mM phosphate buffer, 3mM VP9; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate buffer6.72ambient298
4HNCACB20mM phosphate buffer, 3mM VP9; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate buffer6.72ambient298
5CBCA(CO)NH20mM phosphate buffer, 3mM VP9; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate buffer6.72ambient298
6HSQC20mM phosphate buffer, 3mM VP9; 90% H2O, 10% D2O90% H2O/10% D2O20mM phosphate buffer6.72ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerDRX500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2004Delaglio, F.
2structure solutionCYANA2.1Guntert, P.
3data analysisNMRView5.2.2Johnson, B.A.
4refinementCYANA2.1Guntert, P.