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Protein of Unknown Function EF2458 from Enterococcus faecalis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 291 35% (v/v) 2-methyl-2,4-pentanediol, 0.1 M HEPES, 0.2 M NaCl, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.51 51.09
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.614 α = 90 b = 54.614 β = 90 c = 142.121 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-02-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97933 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 39.4 98.7 0.104 34.5 15.9 12040 12040 49.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.26 91.2 0.669 1.83 8.4 933
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD 2.2 39.5 11997 11997 1176 98.78 0.1989 0.1989 0.1992 0.1959 0.2436 0.2047 RANDOM 53.532
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.58 1.29 2.58 -3.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.429 r_dihedral_angle_4_deg 19.058 r_dihedral_angle_3_deg 18.885 r_dihedral_angle_1_deg 8.21 r_scangle_it 4.241 r_scbond_it 2.694 r_mcangle_it 1.804 r_angle_refined_deg 1.535 r_mcbond_it 1.27 r_nbtor_refined 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.429 r_dihedral_angle_4_deg 19.058 r_dihedral_angle_3_deg 18.885 r_dihedral_angle_1_deg 8.21 r_scangle_it 4.241 r_scbond_it 2.694 r_mcangle_it 1.804 r_angle_refined_deg 1.535 r_mcbond_it 1.27 r_nbtor_refined 0.308 r_symmetry_vdw_refined 0.262 r_nbd_refined 0.222 r_xyhbond_nbd_refined 0.151 r_symmetry_hbond_refined 0.118 r_chiral_restr 0.115 r_bond_refined_d 0.017 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1326 Nucleic Acid Atoms Solvent Atoms 56 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection SCALEPACK data scaling HKL-3000 phasing SHELXD phasing MLPHARE phasing DM phasing SOLVE phasing RESOLVE phasing