X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
3.2261.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 101.4α = 90
b = 101.4β = 90
c = 42.59γ = 120
Symmetry
Space GroupP 63 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2005-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X122.00EMBL/DESY, HAMBURGX12

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.15307391

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT2.1530722316899.850.216470.214440.32262RANDOM51.653
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.35-1.18-2.353.53
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg44.198
r_dihedral_angle_3_deg16.513
r_dihedral_angle_1_deg5.825
r_scangle_it5.37
r_scbond_it3.833
r_angle_refined_deg1.521
r_mcangle_it1.519
r_mcbond_it1.183
r_angle_other_deg0.797
r_symmetry_vdw_refined0.287
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg44.198
r_dihedral_angle_3_deg16.513
r_dihedral_angle_1_deg5.825
r_scangle_it5.37
r_scbond_it3.833
r_angle_refined_deg1.521
r_mcangle_it1.519
r_mcbond_it1.183
r_angle_other_deg0.797
r_symmetry_vdw_refined0.287
r_xyhbond_nbd_refined0.209
r_symmetry_vdw_other0.209
r_symmetry_hbond_refined0.208
r_nbd_refined0.19
r_mcbond_other0.185
r_nbd_other0.177
r_nbtor_refined0.175
r_chiral_restr0.097
r_nbtor_other0.093
r_bond_refined_d0.016
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms687
Nucleic Acid Atoms
Solvent Atoms52
Heterogen Atoms5

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
CCP4data scaling
FFTphasing