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Anomalous substructure of hydroxynitrile lyase
Crystallization Crystal Properties Matthews coefficient Solvent content 2.73 54.88
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.09 α = 90 b = 106.05 β = 90 c = 128.18 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.84 30 28295
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.84 30 27695 600 99.93 0.17728 0.17686 0.1818 0.19654 RANDOM 23.84
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.42 0.78 -1.2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.941 r_dihedral_angle_3_deg 13.252 r_dihedral_angle_4_deg 8.237 r_dihedral_angle_1_deg 6.011 r_scangle_it 5.443 r_scbond_it 4.162 r_angle_other_deg 1.678 r_angle_refined_deg 1.598 r_mcangle_it 1.534 r_mcbond_it 1.174
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.941 r_dihedral_angle_3_deg 13.252 r_dihedral_angle_4_deg 8.237 r_dihedral_angle_1_deg 6.011 r_scangle_it 5.443 r_scbond_it 4.162 r_angle_other_deg 1.678 r_angle_refined_deg 1.598 r_mcangle_it 1.534 r_mcbond_it 1.174 r_nbd_refined 0.272 r_mcbond_other 0.265 r_nbd_other 0.19 r_symmetry_vdw_other 0.185 r_nbtor_refined 0.184 r_symmetry_hbond_refined 0.133 r_xyhbond_nbd_refined 0.131 r_chiral_restr 0.1 r_nbtor_other 0.085 r_symmetry_vdw_refined 0.046 r_bond_refined_d 0.018 r_gen_planes_refined 0.008 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2061 Nucleic Acid Atoms Solvent Atoms 181 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing