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Anomalous substructure of Glucose isomerase
Crystallization Crystal Properties Matthews coefficient Solvent content 2.7 54.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 93.02 α = 90 b = 97.59 β = 90 c = 102.77 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 30 40124
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.85 30 39312 812 99.75 0.15253 0.152 0.1667 0.17701 RANDOM 12.945
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.17 1.41 -0.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.6 r_dihedral_angle_4_deg 17.189 r_dihedral_angle_3_deg 13.109 r_scangle_it 6.207 r_dihedral_angle_1_deg 5.083 r_scbond_it 4.289 r_mcangle_it 1.889 r_angle_refined_deg 1.652 r_mcbond_it 1.285 r_angle_other_deg 0.882
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.6 r_dihedral_angle_4_deg 17.189 r_dihedral_angle_3_deg 13.109 r_scangle_it 6.207 r_dihedral_angle_1_deg 5.083 r_scbond_it 4.289 r_mcangle_it 1.889 r_angle_refined_deg 1.652 r_mcbond_it 1.285 r_angle_other_deg 0.882 r_mcbond_other 0.342 r_symmetry_vdw_other 0.331 r_symmetry_vdw_refined 0.288 r_metal_ion_refined 0.237 r_nbd_refined 0.23 r_nbd_other 0.191 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.182 r_symmetry_hbond_refined 0.151 r_chiral_restr 0.106 r_nbtor_other 0.086 r_bond_refined_d 0.019 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3041 Nucleic Acid Atoms Solvent Atoms 238 Heterogen Atoms 3
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing