2FVA

Structure of 18:0-ACP with docked fatty acid


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY2 mM protein, 10 mM MES pH 6.1, 100 mM NaCl, 95% H2O / 5% D2O95% H2O/5% D2O100 mM NaCl6.11 atm287
23D_13C-separated_NOESY2 mM protein, 10 mM MES pH 6.1, 100 mM NaCl, 95% H2O / 5% D2O95% H2O/5% D2O100 mM NaCl6.11 atm287
3f1 filtered NOESY-15N HSQC2 mM protein, 10 mM MES pH 6.1, 100 mM NaCl, 95% H2O / 5% D2O95% H2O/5% D2O100 mM NaCl6.11 atm287
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX500
2BrukerDMX600
3BrukerDMX750
4VarianINOVA600
NMR Refinement
MethodDetailsSoftware
Torsion angle dynamics followed by torsion angle dynamics with ambiguous restraints, NOESY restraints, and ramachandran database potentialsUsed CYANA for initial structure generation. Docking of the fatty acid (with ramachandran database potentials) was performed in XPLOR-NIH 2.0.12CYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with lowest energy whose fatty acids form a aligned cluster
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.1
2refinementXPLOR-NIH2.12
3collectionXwinNMR2.6
4collectionVNMR6.1
5data analysisNMRPipe
6data analysisSparky3.111