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The crystal structure of the FdhE protein from Pseudomonas aeruginosa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 298 0.05M (NH4)2SO4, 0.1M Tris pH8.5, 25% P 5K MME, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.32 46.89
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 46.261 α = 90 b = 96.617 β = 90 c = 140.62 γ = 90
Symmetry Space Group P 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2005-07-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9798 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 97 99.61 0.068 33.8 8.7 35740 35601 2 2 35
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.16 96.72 0.424 3.8 7.5 2714
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.1 96.67 35740 35601 1890 99.61 0.19902 0.19665 0.24264 0.2266 RANDOM 34.994
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.45 -0.32 0.77
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.561 r_dihedral_angle_3_deg 16.758 r_dihedral_angle_4_deg 16.219 r_dihedral_angle_1_deg 6.604 r_scangle_it 2.128 r_scbond_it 1.467 r_angle_refined_deg 1.407 r_mcangle_it 1.051 r_mcbond_it 0.931 r_angle_other_deg 0.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.561 r_dihedral_angle_3_deg 16.758 r_dihedral_angle_4_deg 16.219 r_dihedral_angle_1_deg 6.604 r_scangle_it 2.128 r_scbond_it 1.467 r_angle_refined_deg 1.407 r_mcangle_it 1.051 r_mcbond_it 0.931 r_angle_other_deg 0.88 r_symmetry_vdw_other 0.24 r_symmetry_vdw_refined 0.235 r_nbd_refined 0.2 r_nbd_other 0.189 r_xyhbond_nbd_refined 0.188 r_symmetry_hbond_refined 0.183 r_nbtor_refined 0.171 r_mcbond_other 0.125 r_nbtor_other 0.086 r_chiral_restr 0.083 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4364 Nucleic Acid Atoms Solvent Atoms 369 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling