X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1micro batch under oil4.5277PEG 8000, pH 4.5, micro batch under oil, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.6453.43

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 84.822α = 90
b = 90.32β = 90
c = 156.299γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMAR scanner 345 mm plate2004-04-25MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMAX II BEAMLINE I7110.957MAX III711

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.555099.9164723164723
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.551.5999.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.5519.69164723164723872899.730.1930.1930.1910.214RANDOM21.485
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.613
r_scangle_it3.512
r_scbond_it2.309
r_mcangle_it1.622
r_angle_refined_deg1.449
r_mcbond_it0.919
r_angle_other_deg0.83
r_symmetry_vdw_other0.342
r_symmetry_vdw_refined0.308
r_nbd_other0.254
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.613
r_scangle_it3.512
r_scbond_it2.309
r_mcangle_it1.622
r_angle_refined_deg1.449
r_mcbond_it0.919
r_angle_other_deg0.83
r_symmetry_vdw_other0.342
r_symmetry_vdw_refined0.308
r_nbd_other0.254
r_symmetry_hbond_refined0.245
r_nbd_refined0.24
r_xyhbond_nbd_refined0.214
r_chiral_restr0.105
r_nbtor_other0.084
r_metal_ion_refined0.076
r_bond_refined_d0.016
r_gen_planes_refined0.007
r_gen_planes_other0.005
r_bond_other_d0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7496
Nucleic Acid Atoms
Solvent Atoms1170
Heterogen Atoms9

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
MOSFLMdata reduction
CCP4data scaling
AMoREphasing