2FGY

Beta Carbonic Anhydrase from the Carboxysomal Shell of Halothiobacillus neapolitanus (CsoSCA)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP72930.1M HEPES, pH 7.0, 0.2M magnesium chloride, 10% ethanol, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.3948.57

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 47.738α = 66.84
b = 77.636β = 78.82
c = 82.714γ = 79.17
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315KOHZU: Double Crystal Si(111)2005-04-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.21.03320ALS8.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.290980.1235.7523425278944.1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.2894.70.4883.25120

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMIRASTHROUGHOUT2.275.385278852788265697.840.1710.1710.1690.217RANDOM35.114
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.090.80.13-0.40.8-0.67
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.166
r_dihedral_angle_4_deg18.326
r_dihedral_angle_3_deg15.473
r_dihedral_angle_1_deg5.186
r_scangle_it3.918
r_scbond_it2.482
r_angle_refined_deg1.617
r_mcangle_it1.475
r_mcbond_it0.924
r_symmetry_vdw_refined0.307
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.166
r_dihedral_angle_4_deg18.326
r_dihedral_angle_3_deg15.473
r_dihedral_angle_1_deg5.186
r_scangle_it3.918
r_scbond_it2.482
r_angle_refined_deg1.617
r_mcangle_it1.475
r_mcbond_it0.924
r_symmetry_vdw_refined0.307
r_nbtor_refined0.306
r_nbd_refined0.207
r_symmetry_hbond_refined0.181
r_xyhbond_nbd_refined0.158
r_chiral_restr0.123
r_metal_ion_refined0.033
r_bond_refined_d0.01
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7370
Nucleic Acid Atoms
Solvent Atoms557
Heterogen Atoms4

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MLPHAREphasing
DMphasing
REFMACrefinement
PDB_EXTRACTdata extraction
BOSdata collection