2FFS

Structure of PR10-allergen-like protein PA1206 from Pseudomonas aeruginosa PAO1


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP4.62986M ammonium nitrate, 0.1M sodium acetate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
3.5665.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 90.72α = 90
b = 90.72β = 90
c = 107.179γ = 120
Symmetry
Space GroupP 65

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray103CCDADSC QUANTUM 3152005-10-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.97940APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.55098.10.08336.78.71700017000-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.59870.5331.586.11496

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.531.6916881168818741000.2230.2230.2210.261RANDOM50.668
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.351.172.35-3.52
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.406
r_dihedral_angle_4_deg18.867
r_dihedral_angle_3_deg18.538
r_dihedral_angle_1_deg6.656
r_scangle_it5.024
r_scbond_it3.355
r_angle_refined_deg1.926
r_mcangle_it1.724
r_mcbond_it1.143
r_nbtor_refined0.326
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.406
r_dihedral_angle_4_deg18.867
r_dihedral_angle_3_deg18.538
r_dihedral_angle_1_deg6.656
r_scangle_it5.024
r_scbond_it3.355
r_angle_refined_deg1.926
r_mcangle_it1.724
r_mcbond_it1.143
r_nbtor_refined0.326
r_nbd_refined0.225
r_symmetry_vdw_refined0.182
r_symmetry_hbond_refined0.182
r_xyhbond_nbd_refined0.165
r_chiral_restr0.116
r_bond_refined_d0.022
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2216
Nucleic Acid Atoms
Solvent Atoms37
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MLPHAREphasing
DMphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
HKL-2000data scaling