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Structure of MoaA in complex with 5'-GTP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 298 3.15 M Na formate, 90 mM HEPES, 3% (v/v) DMSO, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.02 59.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 48.015 α = 90 b = 103.449 β = 90 c = 191.217 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2005-04-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X26C 1.100 NSLS X26C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.349 50 91.4 37116
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.349 2.43 76.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.349 20 35176 1859 91.08 0.2286 0.2286 0.22025 0.2155 0.27143 0.2664 RANDOM 64.097
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.86 4.47 -1.61
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.919 r_dihedral_angle_4_deg 21.192 r_dihedral_angle_3_deg 19.604 r_dihedral_angle_1_deg 6.863 r_scangle_it 3.059 r_angle_refined_deg 2.434 r_scbond_it 2.081 r_mcangle_it 1.166 r_mcbond_it 0.718 r_nbtor_refined 0.309
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.919 r_dihedral_angle_4_deg 21.192 r_dihedral_angle_3_deg 19.604 r_dihedral_angle_1_deg 6.863 r_scangle_it 3.059 r_angle_refined_deg 2.434 r_scbond_it 2.081 r_mcangle_it 1.166 r_mcbond_it 0.718 r_nbtor_refined 0.309 r_nbd_refined 0.245 r_symmetry_vdw_refined 0.243 r_xyhbond_nbd_refined 0.189 r_chiral_restr 0.188 r_metal_ion_refined 0.155 r_symmetry_hbond_refined 0.135 r_bond_refined_d 0.023 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5273 Nucleic Acid Atoms Solvent Atoms 127 Heterogen Atoms 118
Software Software Software Name Purpose CBASS data collection SCALEPACK data scaling FFT model building REFMAC refinement FFT phasing