2EZ5

Solution Structure of the dNedd4 WW3* Domain- Comm LPSY Peptide Complex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 15N1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U-15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,90% H2O/10% D2O; 1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,100% D2O; 1.4 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.0 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL, 90% H2O/10% D2O10 mM NA PHOS, 20 mM NACL mM NA PHOS, 20 mM NACL; 10 mM NA PHOS, 20 mM NACL7.01 atm288
213C-EDITED NOESY1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U-15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,90% H2O/10% D2O; 1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,100% D2O; 1.4 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.0 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL, 90% H2O/10% D2O10 mM NA PHOS, 20 mM NACL mM NA PHOS, 20 mM NACL; 10 mM NA PHOS, 20 mM NACL7.01 atm288
33D F1-13C1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U-15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,90% H2O/10% D2O; 1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,100% D2O; 1.4 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.0 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL, 90% H2O/10% D2O10 mM NA PHOS, 20 mM NACL mM NA PHOS, 20 mM NACL; 10 mM NA PHOS, 20 mM NACL7.01 atm288
415N FILTERED NOESY1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U-15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,90% H2O/10% D2O; 1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,100% D2O; 1.4 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.0 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL, 90% H2O/10% D2O10 mM NA PHOS, 20 mM NACL mM NA PHOS, 20 mM NACL; 10 mM NA PHOS, 20 mM NACL7.01 atm288
52D F1-13C1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U-15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,90% H2O/10% D2O; 1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,100% D2O; 1.4 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.0 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL, 90% H2O/10% D2O10 mM NA PHOS, 20 mM NACL mM NA PHOS, 20 mM NACL; 10 mM NA PHOS, 20 mM NACL7.01 atm288
615N F2-13C1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U-15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,90% H2O/10% D2O; 1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,100% D2O; 1.4 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.0 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL, 90% H2O/10% D2O10 mM NA PHOS, 20 mM NACL mM NA PHOS, 20 mM NACL; 10 mM NA PHOS, 20 mM NACL7.01 atm288
715N FILTERED NOESY1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U-15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,90% H2O/10% D2O; 1.1 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.1 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL,100% D2O; 1.4 MM DNEDD4 WW3* DOMAIN, U- 13C,U -15N, 1.0 MM COMM LPSY PEPTIDE, UNLABELLED, 10 MM NA PHOS, PH 7.0, 20 MM NACL, 90% H2O/10% D2O10 mM NA PHOS, 20 mM NACL mM NA PHOS, 20 mM NACL; 10 mM NA PHOS, 20 mM NACL7.01 atm288
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number30
Representative Model1 (n/a)
Additional NMR Experimental Information
DetailsMIXING TIMES WERE: 175 MS FOR THE 3D F1,F3-13C,15N EDITED NOESY; 140 FOR THE DOUBLE FILTERED NOESY; 250 FOR THE HALF-FILTERED NOESY
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIA1.0NILGES, M.
2structure solutionNMRPipe2.3
3structure solutionNMRView5.2.2
4structure solutionARIA1.0