2EVZ

Structure of RNA Binding Domains 3 and 4 of Polypyrimidine Tract Binding Protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1HNCA1mM PTB RBD34 15N, 13C; 20mM NaCl; 10mM sodium phosphate; 90% H2O, 10% D2O90% H2O/10% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
2HNCOCA1mM PTB RBD34 15N, 13C; 20mM NaCl; 10mM sodium phosphate; 90% H2O, 10% D2O90% H2O/10% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
3CBCACONH1mM PTB RBD34 15N, 13C; 20mM NaCl; 10mM sodium phosphate; 90% H2O, 10% D2O90% H2O/10% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
4HNCACB1mM PTB RBD34 15N, 13C; 20mM NaCl; 10mM sodium phosphate; 90% H2O, 10% D2O90% H2O/10% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
53D_15N-separated_NOESY1mM PTB RBD34 15N; 20mM NaCl; 10mM sodium phosphate; 90% H2O, 10% D2O90% H2O/10% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
63D_13C-separated_NOESY1mM PTB RBD34 15N, 13C; 20mM NaCl; 10mM sodium phosphate; 100% D2O100% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
7HCCH-TOCSY1mM PTB RBD34 15N, 13C; 20mM NaCl; 10mM sodium phosphate; 100% D2O100% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
82D NOESY1mM PTB RBD34 15N; 20mM NaCl; 10mM sodium phosphate; 100% D2O100% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
92D F1-edited, F2-fitered NOESY1mM PTB RBD3 15N, 13C, RBD4 unlabeled; 20mM NaCl; 10mM sodium phosphate; 100% D2O100% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
103D_13C-separated half-filtered NOESY1mM PTB RBD3 15N, 13C, RBD4 unlabeled; 20mM NaCl; 10mM sodium phosphate; 100% D2O100% D2O20mM NaCl, 10mM Na-phosphate6.51 atm303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerDRX600
3BrukerDRX500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number30
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.0Peter Guentert
2refinementAmber7.0David A. Case