2ESY

Structure and influence on stability and activity of the N-terminal propetide part of lung surfactant protein C


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0.5mM SP-Ci(1-31) in 35mM [2H38]dodecylphosphocholine (DPC), 50mM sodium phosphate buffer90% H2O/10% D2O0.17.5ambient297
22D TOCSY0.5mM SP-Ci(1-31) in 35mM [2H38]dodecylphosphocholine (DPC), 50mM sodium phosphate buffer90% H2O/10% D2O0.17.5ambient297
3DQF-COSY0.5mM SP-Ci(1-31) in 35mM [2H38]dodecylphosphocholine (DPC), 50mM sodium phosphate buffer90% H2O/10% D2O0.17.5ambient297
42D NOESY0.5mM SP-Ci(1-31)[2H5]-ethanol07ambient287
52D TOCSY0.5mM SP-Ci(1-31)[2H5]-ethanol07ambient287
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2BrukerDMX600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsthe structures are based on a total of 344 restraints, 263 are NOE-derived distance constraints, 81 dihedral angle restraintsVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy,target function
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (closest to the average,fewest violations,lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR1.1.Dvarian
2processingPROSA3.2P.Guntert
3data analysisXEASY3.0R. Koradi
4structure solutionDYANA2.6P.guntert
5refinementOPAL3.0P.Luginbul