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Solution structure of the first ig-like domain from human CD48 antigen
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 1.15mM 13C, 15N-labeled protein; 20mM d-Tris-HCl(pH7.0); 100mM NaCl 1mM d-DTT; 0.02% NaN3 10% D2O; 90% H2O 120mM 7.0 ambient 293 2 3D_15N-separated_NOESY 1.15mM 13C, 15N-labeled protein; 20mM d-Tris-HCl(pH7.0); 100mM NaCl 1mM d-DTT; 0.02% NaN3 10% D2O; 90% H2O 120mM 7.0 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 900 2 Varian INOVA 800
NMR Refinement Method Details Software torsion angle dynamics VNMR
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations, target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details spectrometer_id 1 for 3D_13C-separated_NOESY; spectrometer_id 2 for 3D_15N-separated_NOESY
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 6.1C Varian 2 processing NMRPipe 20031112 Delaglio, F. 3 data analysis NMRView 5.0.4 Johnson, B. A. 4 data analysis KUJIRA 0.9822 Kobayashi, N. 5 structure solution CYANA 2.0.17 Guntert, P. 6 refinement CYANA 2.0.17 Guntert, P.