2E3G

NMR structure of DEF-DAA, a mutant of anopheles defensin DEF-AAA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1DQF-COSY1.9mM DEF-DAA; 40mM sodium acetate buffer90% H2O/10% D2O40mM sodium acetate buffer4.9ambient293
22D TOCSY1.9mM DEF-DAA; 40mM sodium acetate buffer90% H2O/10% D2O40mM sodium acetate buffer4.9ambient293
32D NOESY1.9mM DEF-DAA; 40mM sodium acetate buffer90% H2O/10% D2O40mM sodium acetate buffer4.9ambient293
4DQF-COSY1.9mM DEF-DAA; 40mM sodium acetate buffer90% H2O/10% D2O40mM sodium acetate buffer4.9ambient303
52D TOCSY1.9mM DEF-DAA; 40mM sodium acetate buffer90% H2O/10% D2O40mM sodium acetate buffer4.9ambient303
62D NOESY1.9mM DEF-DAA; 40mM sodium acetate buffer90% H2O/10% D2O40mM sodium acetate buffer4.9ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
Simulated annealing with torsion angle space (ARIA/CNS)The structures are based on a total of 746 NOE-derived distance constraints.NMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy and the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest restraint energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.2Delaglio
2data analysisNMRView5.0Johnson
3structure solutionARIA1.1Linge & Nilges
4structure solutionCNS1.1Brunger
5refinementCNS1.1Brunger