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Novel Bromate Species trapped within a Protein Crystal
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1HEL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 4.8 273 pH 4.8, VAPOR DIFFUSION, temperature 273K
Crystal Properties Matthews coefficient Solvent content 1.95 38.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.21 α = 90 b = 77.21 β = 90 c = 38.191 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2002-10-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X13 EMBL/DESY, HAMBURG X13
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 50 95.2 0.056 27.9 60421 57538 3.92 1.96
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R 1HEL 1.25 8 60421 57538 5770 95.2 0.1886 0.1824 0.1781 0.1726 0.213 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 6 1225.17
RMS Deviations Key Refinement Restraint Deviation s_zero_chiral_vol 0.094 s_non_zero_chiral_vol 0.088 s_similar_adp_cmpnt 0.048 s_angle_d 0.034 s_from_restr_planes 0.0311 s_bond_d 0.019 s_similar_dist s_anti_bump_dis_restr s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1001 Nucleic Acid Atoms Solvent Atoms 298 Heterogen Atoms 29
Software Software Software Name Purpose MAR345 data collection SCALEPACK data scaling CCP4 model building HipHop refinement CCP4 phasing SHELXL refinement