2CNJ
NMR studies on the interaction of Insulin-Growth Factor II (IGF-II) with IGF2R domain 11
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | HSQC | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
2 | TOCSY | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
3 | NOESY | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
4 | HNCA | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
5 | HNCACB | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
6 | CBCACONH | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
7 | HCCH- TCOSY | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
8 | HNHA | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
9 | HNBA | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
10 | HNCO | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
11 | HNCACO | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 | |||
12 | HNCOCA | 5% D2O/ 95% H2O | 5.5 | 1.0 atm | 298.0 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
WATER REFINED IN CNS | WATER REFINED USING RECORRD SCIPTS IN CNS. A.J.NEDERVEEN,J.F.DORELEIJERS,W.VRANKEN, Z.MILLER, C.A.SPRONK, S.B.NABUURS, P.GUNTERT, M.LIVNY, J.L.MARKLEY, M.NILGES, E.L.ULRICH, R.KAPTEIN AND A.M.BONVIN, PROTEINS. RECOORD: A RECALCULATED COORDINATES DATABASE OF 500+ PROTEINS FROM THE PDB USING RESTRAINTS FROM THE BIOMAGRESBANK. PROTEINS 59, 662-672. | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | LOWEST ENERGY, LEAST VIOLATION |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON UNLABELLED, 15N AND 13C, 15N-LABELED DOMAIN 11. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE,SIMONSON,WARREN | |
2 | structure solution | SPARKY | ||
3 | structure solution | NMRDRAW | ||
4 | structure solution | NMRPIPE | ||
5 | structure solution | CNS |