X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
172908-10% PEG 8000, 8-9% ETHYLENE GLYCOL, 0.1 M HEPES (PH 7.0- 8.0), 17 DEG C
Crystal Properties
Matthews coefficientSolvent content
2.852

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 167.914α = 90
b = 167.914β = 90
c = 50.242γ = 120
Symmetry
Space GroupP 61

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCDTORROIDAL MIRROR2005-05-06MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-4ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.64399.90.0624.217.79610
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.63.81000.41.86.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT3.6145.86918746599.90.3290.3280.357RANDOM72.5
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.51-1.75-3.515.26
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg42.076
r_dihedral_angle_3_deg21.617
r_dihedral_angle_4_deg19.597
r_dihedral_angle_1_deg5.889
r_angle_refined_deg1.28
r_nbtor_refined0.315
r_nbd_refined0.282
r_symmetry_vdw_refined0.248
r_symmetry_hbond_refined0.212
r_xyhbond_nbd_refined0.146
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg42.076
r_dihedral_angle_3_deg21.617
r_dihedral_angle_4_deg19.597
r_dihedral_angle_1_deg5.889
r_angle_refined_deg1.28
r_nbtor_refined0.315
r_nbd_refined0.282
r_symmetry_vdw_refined0.248
r_symmetry_hbond_refined0.212
r_xyhbond_nbd_refined0.146
r_chiral_restr0.083
r_bond_refined_d0.013
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_it
r_mcbond_other
r_mcangle_it
r_mcangle_other
r_scbond_it
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3602
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
SnBphasing
SHARPphasing
REFMACrefinement