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HUMAN ORNITHINE AMINOTRANSFERASE COMPLEXED WITH L-CANALINE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1OAT PDB ENTRY 1OAT
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 pH 6.5
Crystal Properties Matthews coefficient Solvent content 2.68 51.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 115.915 α = 90 b = 115.915 β = 90 c = 185.729 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD PRINCETON 2K DUAL SLITS 1996-01-10 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE A1 CHESS A1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 50 87.4 0.098 0.098 13.7 4.3 56813 2 23.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 66.3 0.18 0.18 5.33 3.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1OAT 2.3 50 2 54424 5474 84.1 0.212 0.212 0.2219 0.238 RANDOM 28.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.77 1.76 2.77 -5.53
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 23.5 x_scangle_it 3.06 x_mcangle_it 2.09 x_scbond_it 2.03 x_angle_deg 1.3 x_mcbond_it 1.29 x_improper_angle_d 1.25 x_bond_d 0.007 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 23.5 x_scangle_it 3.06 x_mcangle_it 2.09 x_scbond_it 2.03 x_angle_deg 1.3 x_mcbond_it 1.29 x_improper_angle_d 1.25 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9450 Nucleic Acid Atoms Solvent Atoms 276 Heterogen Atoms 72
Software Software Software Name Purpose X-PLOR model building X-PLOR refinement DENZO data reduction SCALEPACK data scaling X-PLOR phasing